Compresses/decompresses files
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
input{:bash}
:file
file to compress or to decompress
output{:bash}
${output}{:bash}
Output compressed/decompressed file
*.
gzi{:bash}
*.gzi{:bash}
Optional gzip index file for compressed inputs
*.gzi
versions_tabix{:bash}
${task.process}{:bash}
:string
The process the versions were collected from
tabix{:bash}
The tool name
tabix -h 2>&1 | grep -oP 'Version:\s*\K[^\s]+'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Bgzip compresses or decompresses files in a similar manner to, and compatible with, gzip.
